Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 AC129492.6-201ENST00000611383 1305 ntBASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC85AQ96PX6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 AC106820.2-201ENST00000563775 3264 ntBASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 CYMP-203ENST00000474680 1263 ntBASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 AL513210.1-201ENST00000629608 234 ntBASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC85AQ96PX6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC85AQ96PX6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 ACTG1P14-201ENST00000446382 1122 ntBASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 TIMM8BP1-201ENST00000452384 211 ntBASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 AC022145.2-201ENST00000598203 171 ntBASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 REXO1L3P-201ENST00000622202 1288 ntBASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC85AQ96PX6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC85AQ96PX6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms