Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 AC092068.3-201ENST00000587894 2016 ntBASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.02■□□□□ 0.15
MS4A4EQ96PG1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 NKILA-202ENST00000614771 2598 ntBASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 NKAPP1-205ENST00000585790 367 ntBASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 CLEC4GP1-201ENST00000596555 870 ntBASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MS4A4EQ96PG1 PAN3-AS1-201ENST00000563843 1351 ntBASIC16■□□□□ 0.15
MS4A4EQ96PG1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 SAPCD2P3-201ENST00000455031 850 ntBASIC16■□□□□ 0.15
MS4A4EQ96PG1 FGFR3P6-201ENST00000457012 610 ntBASIC16■□□□□ 0.15
MS4A4EQ96PG1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MS4A4EQ96PG1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16■□□□□ 0.15
MS4A4EQ96PG1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MS4A4EQ96PG1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms