Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC103564.2-201ENST00000432853 1299 ntBASIC16.25■□□□□ 0.19
COL21A1Q96P44 TSPY18P-201ENST00000441642 509 ntBASIC16.25■□□□□ 0.19
COL21A1Q96P44 KRT18P31-201ENST00000506277 1292 ntBASIC16.25■□□□□ 0.19
COL21A1Q96P44 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 AC091304.2-201ENST00000564639 760 ntBASIC16.25■□□□□ 0.19
COL21A1Q96P44 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
COL21A1Q96P44 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL21A1Q96P44 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL21A1Q96P44 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 AC106886.4-201ENST00000623557 2502 ntBASIC16.24■□□□□ 0.19
COL21A1Q96P44 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.24■□□□□ 0.19
COL21A1Q96P44 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 LINC01711-201ENST00000598340 967 ntBASIC16.24■□□□□ 0.19
COL21A1Q96P44 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL21A1Q96P44 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL21A1Q96P44 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 IGHV3-52-201ENST00000519770 353 ntBASIC16.23■□□□□ 0.19
COL21A1Q96P44 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 AC109462.3-201ENST00000573934 613 ntBASIC16.23■□□□□ 0.19
COL21A1Q96P44 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL21A1Q96P44 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.23■□□□□ 0.19
COL21A1Q96P44 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COL21A1Q96P44 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms