Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 MIR4751-201ENST00000578027 74 ntBASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 TERC-201ENST00000602385 541 ntBASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 AC004790.2-201ENST00000623588 572 ntBASIC17.67■□□□□ 0.42
RPRD1AQ96P16 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.67■□□□□ 0.42
RPRD1AQ96P16 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPRD1AQ96P16 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 MRPL20P1-201ENST00000400819 433 ntBASIC17.66■□□□□ 0.42
RPRD1AQ96P16 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.66■□□□□ 0.42
RPRD1AQ96P16 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 MIR574-201ENST00000385209 96 ntBASIC17.65■□□□□ 0.42
RPRD1AQ96P16 MIR940-201ENST00000401276 94 ntBASIC17.65■□□□□ 0.42
RPRD1AQ96P16 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPRD1AQ96P16 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms