Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AL096828.2-201ENST00000567259 1965 ntBASIC18.2■□□□□ 0.5
TIFAQ96CG3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIFAQ96CG3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIFAQ96CG3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TIFAQ96CG3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.2■□□□□ 0.5
TIFAQ96CG3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIFAQ96CG3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AP006294.1-201ENST00000415407 339 ntBASIC18.19■□□□□ 0.5
TIFAQ96CG3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 RN7SL752P-201ENST00000463779 287 ntBASIC18.19■□□□□ 0.5
TIFAQ96CG3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC003101.2-201ENST00000612557 442 ntBASIC18.19■□□□□ 0.5
TIFAQ96CG3 AC018529.1-201ENST00000613063 361 ntBASIC18.19■□□□□ 0.5
TIFAQ96CG3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TIFAQ96CG3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TIFAQ96CG3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 HLA-V-204ENST00000476601 1289 ntBASIC18.18■□□□□ 0.5
TIFAQ96CG3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TIFAQ96CG3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TIFAQ96CG3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIFAQ96CG3 DGCR5-201ENST00000399539 862 ntBASIC18.17■□□□□ 0.5
TIFAQ96CG3 AC112492.5-201ENST00000421897 457 ntBASIC18.17■□□□□ 0.5
TIFAQ96CG3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 AC009477.1-201ENST00000452936 217 ntBASIC18.17■□□□□ 0.5
TIFAQ96CG3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TIFAQ96CG3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms