Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RHBDF1Q96CC6 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
RHBDF1Q96CC6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RHBDF1Q96CC6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 AL356309.3-201ENST00000624132 1934 ntBASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RHBDF1Q96CC6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 FLJ38576-201ENST00000623820 2459 ntBASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AC064862.7-201ENST00000604520 867 ntBASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AL353135.1-201ENST00000606729 504 ntBASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 REXO1L6P-202ENST00000619970 1078 ntBASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 RNF216P1-203ENST00000404404 2427 ntBASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RHBDF1Q96CC6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RHBDF1Q96CC6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms