Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPGRQ92834 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21■□□□□ 0.95
RPGRQ92834 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21■□□□□ 0.95
RPGRQ92834 AL512638.1-201ENST00000457493 794 ntBASIC21■□□□□ 0.95
RPGRQ92834 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21■□□□□ 0.95
RPGRQ92834 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21■□□□□ 0.95
RPGRQ92834 MTRF1LP2-201ENST00000506027 1122 ntBASIC21■□□□□ 0.95
RPGRQ92834 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21■□□□□ 0.95
RPGRQ92834 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21■□□□□ 0.95
RPGRQ92834 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
RPGRQ92834 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPGRQ92834 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPGRQ92834 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.99■□□□□ 0.95
RPGRQ92834 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 AC069120.2-201ENST00000524091 540 ntBASIC20.99■□□□□ 0.95
RPGRQ92834 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.99■□□□□ 0.95
RPGRQ92834 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.99■□□□□ 0.95
RPGRQ92834 AL031055.1-201ENST00000606362 631 ntBASIC20.99■□□□□ 0.95
RPGRQ92834 AL158211.3-201ENST00000607385 239 ntBASIC20.99■□□□□ 0.95
RPGRQ92834 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.99■□□□□ 0.95
RPGRQ92834 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RPGRQ92834 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPGRQ92834 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.98■□□□□ 0.95
RPGRQ92834 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 METTL26-204ENST00000397665 558 ntTSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 FAM207CP-201ENST00000443486 507 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 ALG1L8P-201ENST00000533887 760 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.98■□□□□ 0.95
RPGRQ92834 AC012645.4-201ENST00000610691 1061 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 AC008267.7-201ENST00000624570 1194 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 AC063926.2-201ENST00000623766 1308 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 AC012317.2-201ENST00000623305 2251 ntBASIC20.98■□□□□ 0.95
RPGRQ92834 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPGRQ92834 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.98■□□□□ 0.95
RPGRQ92834 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.98■□□□□ 0.95
RPGRQ92834 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.97■□□□□ 0.95
RPGRQ92834 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 RNU1-129P-201ENST00000384064 167 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPGRQ92834 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.97■□□□□ 0.95
RPGRQ92834 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms