Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 RNU1-129P-201ENST00000384064 167 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 TREML5P-201ENST00000421694 576 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 SLC25A39P2-201ENST00000537614 270 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 U1.21-201ENST00000580816 167 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 AL031055.1-201ENST00000606362 631 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
RAPGEF4Q8WZA2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RAPGEF4Q8WZA2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 AC236430.1-201ENST00000402231 743 ntBASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 SLC25A6P5-201ENST00000435663 894 ntBASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 AC091167.2-201ENST00000579581 588 ntBASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 TOP3BP1-201ENST00000420768 1380 ntBASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RAPGEF4Q8WZA2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 SLC22A20-204ENST00000530038 1673 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 AC002472.2-201ENST00000442739 958 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 TSPY16P-201ENST00000449843 468 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 TERF1P3-201ENST00000505638 1227 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 IGHV3-42-201ENST00000520410 361 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 AC008267.7-201ENST00000624570 1194 ntBASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RAPGEF4Q8WZA2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 EGFEM1P-202ENST00000431685 1563 ntBASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
RAPGEF4Q8WZA2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms