Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 AC073389.1-201ENST00000595595 795 ntBASIC20.66■□□□□ 0.9
SNED1Q8TER0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNED1Q8TER0 AC007967.4-201ENST00000614700 386 ntBASIC20.66■□□□□ 0.9
SNED1Q8TER0 AL138828.2-201ENST00000615812 383 ntBASIC20.66■□□□□ 0.9
SNED1Q8TER0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNED1Q8TER0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNED1Q8TER0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNED1Q8TER0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.66■□□□□ 0.9
SNED1Q8TER0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.65■□□□□ 0.9
SNED1Q8TER0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNED1Q8TER0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNED1Q8TER0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNED1Q8TER0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.64■□□□□ 0.9
SNED1Q8TER0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNED1Q8TER0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNED1Q8TER0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
SNED1Q8TER0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNED1Q8TER0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 AL512638.1-201ENST00000457493 794 ntBASIC20.63■□□□□ 0.89
SNED1Q8TER0 RARRES2P9-201ENST00000565168 469 ntBASIC20.63■□□□□ 0.89
SNED1Q8TER0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNED1Q8TER0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SNED1Q8TER0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNED1Q8TER0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.62■□□□□ 0.89
SNED1Q8TER0 AL844908.2-201ENST00000609461 460 ntBASIC20.62■□□□□ 0.89
SNED1Q8TER0 AL008721.1-201ENST00000609964 604 ntBASIC20.62■□□□□ 0.89
SNED1Q8TER0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms