Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMC1Q8TDI8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TMC1Q8TDI8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMC1Q8TDI8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC23.87■■□□□ 1.41
TMC1Q8TDI8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TMC1Q8TDI8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TMC1Q8TDI8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.85■■□□□ 1.41
TMC1Q8TDI8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 CROCCP2-202ENST00000412962 2773 ntBASIC23.85■■□□□ 1.41
TMC1Q8TDI8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TMC1Q8TDI8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 AC010507.1-201ENST00000633895 436 ntBASIC23.84■■□□□ 1.41
TMC1Q8TDI8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.84■■□□□ 1.41
TMC1Q8TDI8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 AC002310.6-201ENST00000624451 1377 ntBASIC23.83■■□□□ 1.41
TMC1Q8TDI8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 AC092183.1-201ENST00000469884 875 ntBASIC23.83■■□□□ 1.41
TMC1Q8TDI8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.83■■□□□ 1.41
TMC1Q8TDI8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC23.83■■□□□ 1.4
TMC1Q8TDI8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMC1Q8TDI8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMC1Q8TDI8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMC1Q8TDI8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms