Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 CXCL1P1-201ENST00000502804 216 ntBASIC18■□□□□ 0.47
SHKBP1Q8TBC3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 AC007064.4-201ENST00000637740 555 ntBASIC18■□□□□ 0.47
SHKBP1Q8TBC3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SHKBP1Q8TBC3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 GNAS-203ENST00000306120 1878 ntBASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 AL139327.4-201ENST00000612362 153 ntBASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SHKBP1Q8TBC3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 FAM185BP-201ENST00000443595 716 ntBASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.98■□□□□ 0.47
SHKBP1Q8TBC3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 AC012317.2-201ENST00000623305 2251 ntBASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SHKBP1Q8TBC3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms