Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 AP002469.2-201ENST00000531724 424 ntBASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 AL121912.1-201ENST00000603683 238 ntBASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 OR6D1P-202ENST00000641007 5290 ntBASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH19Q8TAB3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PCDH19Q8TAB3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 SAPCD2P3-201ENST00000455031 850 ntBASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 DUX4L17-201ENST00000557360 1267 ntBASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 NCF1C-201ENST00000438382 1427 ntBASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 AC078925.2-201ENST00000624013 1973 ntBASIC17.7■□□□□ 0.42
PCDH19Q8TAB3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 AP002414.1-201ENST00000391405 1147 ntBASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 MTDHP4-201ENST00000600287 670 ntBASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH19Q8TAB3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH19Q8TAB3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms