Protein–RNA interactions for Protein: Q8NEG5

ZSWIM2, E3 ubiquitin-protein ligase ZSWIM2, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM2Q8NEG5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ZSWIM2Q8NEG5 AC005915.1-201ENST00000624912 2018 ntBASIC18.64■□□□□ 0.58
ZSWIM2Q8NEG5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 SLC25A6P2-201ENST00000497974 877 ntBASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 OR7E47P-204ENST00000575924 449 ntBASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 AC120114.3-201ENST00000611923 658 ntBASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.64■□□□□ 0.57
ZSWIM2Q8NEG5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AC009947.1-201ENST00000444350 727 ntBASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AC108073.2-201ENST00000464002 357 ntBASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 IGHV3-65-201ENST00000523210 341 ntBASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AC008667.4-201ENST00000607370 168 ntBASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AC004790.2-201ENST00000623588 572 ntBASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.63■□□□□ 0.57
ZSWIM2Q8NEG5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 RPL13AP23-201ENST00000480739 586 ntBASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 MIR1199-201ENST00000621445 119 ntBASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZSWIM2Q8NEG5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms