Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 CXCL1P1-201ENST00000502804 216 ntBASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ARHGEF39Q8N4T4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 AC018845.2-201ENST00000568326 409 ntBASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ARHGEF39Q8N4T4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 AC040169.1-201ENST00000565382 521 ntBASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 AC092865.6-201ENST00000642101 219 ntBASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ARHGEF39Q8N4T4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.11■□□□□ 0.17
ARHGEF39Q8N4T4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms