Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AC010460.3-201ENST00000511359 1579 ntBASIC18.21■□□□□ 0.51
RNF135Q8IUD6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF135Q8IUD6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF135Q8IUD6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF135Q8IUD6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF135Q8IUD6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC236430.1-201ENST00000402231 743 ntBASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC096633.1-201ENST00000422446 749 ntBASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC103564.2-201ENST00000432853 1299 ntBASIC18.2■□□□□ 0.5
RNF135Q8IUD6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 TERF1P3-201ENST00000505638 1227 ntBASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 AC007064.4-201ENST00000637740 555 ntBASIC18.2■□□□□ 0.5
RNF135Q8IUD6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF135Q8IUD6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 GAPDHP21-201ENST00000450301 1010 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 AC067863.1-201ENST00000494933 530 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 DUX4L17-201ENST00000557360 1267 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 AC023141.13-201ENST00000604991 943 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 AC008764.6-201ENST00000595909 2069 ntBASIC18.19■□□□□ 0.5
RNF135Q8IUD6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF135Q8IUD6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF135Q8IUD6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms