Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRTM4Q86VH4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 PMS2P7-201ENST00000506558 1336 ntBASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 HCG4B-203ENST00000450128 991 ntBASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRTM4Q86VH4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 SLC25A6P2-201ENST00000497974 877 ntBASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 OR7E47P-204ENST00000575924 449 ntBASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 LINC02012-201ENST00000608206 1725 ntBASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
LRRTM4Q86VH4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM4Q86VH4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms