Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 AL158211.3-201ENST00000607385 239 ntBASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 AC068880.1-201ENST00000507289 2297 ntBASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 AC134043.2-201ENST00000624206 2238 ntBASIC19.78■□□□□ 0.76
OTOP1Q7RTM1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 AL355312.1-201ENST00000407115 2176 ntBASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 SERBP1P5-201ENST00000510079 1181 ntBASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 AC008677.1-201ENST00000519230 1561 ntBASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 AL133373.2-201ENST00000623187 2828 ntBASIC19.77■□□□□ 0.76
OTOP1Q7RTM1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
OTOP1Q7RTM1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
OTOP1Q7RTM1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
OTOP1Q7RTM1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 ARSEP1-201ENST00000420443 635 ntBASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
OTOP1Q7RTM1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 AC009336.1-201ENST00000608941 1553 ntBASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 AC140658.5-201ENST00000438532 169 ntBASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 IGHV3-52-201ENST00000519770 353 ntBASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
OTOP1Q7RTM1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 PIN1P1-201ENST00000412108 996 ntBASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 AC245100.3-201ENST00000441281 285 ntBASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.74■□□□□ 0.75
OTOP1Q7RTM1 AC097493.3-201ENST00000509725 367 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms