Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL009183.1-201ENST00000603760 355 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 AL162274.1-201ENST00000617191 1098 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC004840.1-201ENST00000636359 365 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC009118.2-201ENST00000613275 655 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 ALG1L8P-201ENST00000533887 760 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13CQ709C8 AC017083.2-201ENST00000608069 979 ntBASIC14.12□□□□□ -0.15
VPS13CQ709C8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13CQ709C8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 NEFHP1-201ENST00000412845 2629 ntBASIC14.11□□□□□ -0.15
VPS13CQ709C8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 AC016027.1-202ENST00000607927 1699 ntBASIC14.11□□□□□ -0.15
VPS13CQ709C8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 LYSMD4-203ENST00000378904 2122 ntBASIC14.11□□□□□ -0.15
VPS13CQ709C8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 AC106886.1-201ENST00000568660 600 ntBASIC14.11□□□□□ -0.15
VPS13CQ709C8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13CQ709C8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13CQ709C8 AC002558.1-201ENST00000488906 803 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 MIR3909-201ENST00000579518 119 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 AC004233.3-201ENST00000607794 1269 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 SLC22A20-204ENST00000530038 1673 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 LINC00304-203ENST00000565008 1864 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13CQ709C8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 HMGA1P7-201ENST00000406908 502 ntBASIC14.1□□□□□ -0.15
VPS13CQ709C8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VPS13CQ709C8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms