Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 KRT18P29-201ENST00000397031 1267 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 AC026366.1-201ENST00000488803 879 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 AC090192.1-201ENST00000517740 490 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 AC092666.2-201ENST00000613287 246 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 FSCN1P1-201ENST00000568912 1481 ntBASIC16.22■□□□□ 0.19
LPCAT4Q643R3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LPCAT4Q643R3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 WWOX-216ENST00000569818 525 ntBASIC16.21■□□□□ 0.19
LPCAT4Q643R3 AC008687.5-201ENST00000593746 558 ntBASIC16.21■□□□□ 0.19
LPCAT4Q643R3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LPCAT4Q643R3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LPCAT4Q643R3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.2■□□□□ 0.18
LPCAT4Q643R3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LPCAT4Q643R3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms