Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
C1orf140Q5VVS0 AC009053.2-201ENST00000563701 2365 ntBASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 FRMD8P1-201ENST00000440433 1524 ntBASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 AF238378.1-201ENST00000526806 358 ntBASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 AC064862.7-201ENST00000604520 867 ntBASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 AL353135.1-201ENST00000606729 504 ntBASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
C1orf140Q5VVS0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 MTDHP4-201ENST00000600287 670 ntBASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 AL589182.2-201ENST00000619332 1049 ntBASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 AC092068.3-201ENST00000587894 2016 ntBASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
C1orf140Q5VVS0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 DUSP5P1-201ENST00000441325 1139 ntBASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 UNC93B7-201ENST00000509439 705 ntBASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 AC139887.3-201ENST00000568585 713 ntBASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C1orf140Q5VVS0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms