Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC018695.7-201ENST00000624587 2492 ntBASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LDLRAP1Q5SW96 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC141586.5-201ENST00000624546 2050 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AL031284.1-201ENST00000419297 478 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC026396.1-201ENST00000419388 421 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 HNRNPDP1-201ENST00000439535 754 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AL353135.1-201ENST00000606729 504 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC004706.3-202ENST00000621574 984 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC008735.5-201ENST00000623544 497 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 AC148477.8-201ENST00000624298 468 ntBASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LDLRAP1Q5SW96 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AC093909.1-201ENST00000504731 1122 ntBASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AP001005.1-201ENST00000571755 1248 ntBASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AL023806.1-201ENST00000603994 1649 ntBASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AC116353.5-201ENST00000638148 1699 ntBASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LDLRAP1Q5SW96 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LDLRAP1Q5SW96 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms