Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 AP005117.1-201ENST00000584346 1413 ntBASIC16.39■□□□□ 0.21
SPIN4Q56A73 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 AP002490.2-201ENST00000524791 560 ntBASIC16.39■□□□□ 0.21
SPIN4Q56A73 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 TUBB8P12-201ENST00000308911 1335 ntBASIC16.39■□□□□ 0.21
SPIN4Q56A73 TUBB7P-202ENST00000428444 1305 ntBASIC16.39■□□□□ 0.21
SPIN4Q56A73 TUBB8P7-204ENST00000567960 1332 ntBASIC16.39■□□□□ 0.21
SPIN4Q56A73 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SPIN4Q56A73 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SPIN4Q56A73 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 UPK3BP1-201ENST00000428678 509 ntBASIC16.38■□□□□ 0.21
SPIN4Q56A73 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 AC004817.3-201ENST00000602957 2129 ntBASIC16.38■□□□□ 0.21
SPIN4Q56A73 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SPIN4Q56A73 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SPIN4Q56A73 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 AC124067.4-201ENST00000519691 2379 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 RBM17P3-201ENST00000417687 1192 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 LINC00982-205ENST00000420957 435 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 PRYP5-201ENST00000451909 266 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 AC132008.2-207ENST00000454517 770 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 FOSL1P1-201ENST00000511041 816 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 AC106795.1-205ENST00000512851 1056 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 AP001269.4-201ENST00000609611 512 ntBASIC16.37■□□□□ 0.21
SPIN4Q56A73 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.37■□□□□ 0.21
SPIN4Q56A73 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SPIN4Q56A73 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms