Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 SIRPAP1-201ENST00000448467 1770 ntBASIC15.17■□□□□ 0.02
NKX6-1P78426 AL353593.2-201ENST00000602529 1483 ntBASIC15.17■□□□□ 0.02
NKX6-1P78426 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 AC211486.1-202ENST00000416371 468 ntBASIC15.17■□□□□ 0.02
NKX6-1P78426 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.17■□□□□ 0.02
NKX6-1P78426 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 AC211476.1-201ENST00000503899 468 ntBASIC15.17■□□□□ 0.02
NKX6-1P78426 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NKX6-1P78426 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NKX6-1P78426 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NKX6-1P78426 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.17■□□□□ 0.02
NKX6-1P78426 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NKX6-1P78426 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NKX6-1P78426 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX6-1P78426 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AC023274.1-201ENST00000418278 595 ntBASIC15.16■□□□□ 0.02
NKX6-1P78426 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.16■□□□□ 0.02
NKX6-1P78426 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.16■□□□□ 0.02
NKX6-1P78426 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 AC107918.4-202ENST00000641623 219 ntBASIC15.16■□□□□ 0.02
NKX6-1P78426 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
NKX6-1P78426 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.16■□□□□ 0.02
NKX6-1P78426 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NKX6-1P78426 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 AP002414.3-201ENST00000589352 1468 ntBASIC15.15■□□□□ 0.02
NKX6-1P78426 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX6-1P78426 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX6-1P78426 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX6-1P78426 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.15■□□□□ 0.02
NKX6-1P78426 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms