Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 AL121761.2-201ENST00000598007 1648 ntBASIC17.35■□□□□ 0.37
PRAMEP78395 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.35■□□□□ 0.37
PRAMEP78395 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.35■□□□□ 0.37
PRAMEP78395 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRAMEP78395 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PRAMEP78395 AL139384.1-201ENST00000612143 3047 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.34■□□□□ 0.37
PRAMEP78395 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEP78395 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 SLC25A1P3-201ENST00000395415 828 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
PRAMEP78395 AL020989.1-201ENST00000422979 469 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 ABCD1P5-201ENST00000445663 754 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 FOSL1P1-201ENST00000511041 816 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEP78395 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.34■□□□□ 0.37
PRAMEP78395 MIR3652-201ENST00000579335 131 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.34■□□□□ 0.37
PRAMEP78395 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEP78395 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 AP000867.4-201ENST00000641616 219 ntBASIC17.34■□□□□ 0.37
PRAMEP78395 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
PRAMEP78395 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
PRAMEP78395 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEP78395 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEP78395 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PRAMEP78395 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEP78395 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEP78395 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEP78395 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.33■□□□□ 0.36
PRAMEP78395 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEP78395 SIGLEC30P-201ENST00000455569 941 ntBASIC17.33■□□□□ 0.36
PRAMEP78395 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRAMEP78395 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEP78395 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEP78395 AC060834.1-201ENST00000443027 2032 ntBASIC17.33■□□□□ 0.36
PRAMEP78395 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEP78395 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEP78395 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEP78395 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEP78395 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms