Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ASIC1P78348 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
ASIC1P78348 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.16■□□□□ 0.66
ASIC1P78348 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
ASIC1P78348 RBM17P3-201ENST00000417687 1192 ntBASIC19.16■□□□□ 0.66
ASIC1P78348 LINC00982-205ENST00000420957 435 ntBASIC19.16■□□□□ 0.66
ASIC1P78348 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.16■□□□□ 0.66
ASIC1P78348 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.16■□□□□ 0.66
ASIC1P78348 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.16■□□□□ 0.66
ASIC1P78348 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.16■□□□□ 0.66
ASIC1P78348 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.16■□□□□ 0.66
ASIC1P78348 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.16■□□□□ 0.66
ASIC1P78348 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ASIC1P78348 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 FRMD8P1-201ENST00000440433 1524 ntBASIC19.15■□□□□ 0.66
ASIC1P78348 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.15■□□□□ 0.66
ASIC1P78348 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.15■□□□□ 0.66
ASIC1P78348 MTDHP3-201ENST00000594186 672 ntBASIC19.15■□□□□ 0.66
ASIC1P78348 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ASIC1P78348 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ASIC1P78348 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.15■□□□□ 0.66
ASIC1P78348 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.15■□□□□ 0.66
ASIC1P78348 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ASIC1P78348 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
ASIC1P78348 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.15■□□□□ 0.66
ASIC1P78348 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ASIC1P78348 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.14■□□□□ 0.66
ASIC1P78348 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.14■□□□□ 0.66
ASIC1P78348 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ASIC1P78348 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.14■□□□□ 0.66
ASIC1P78348 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.14■□□□□ 0.65
ASIC1P78348 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.14■□□□□ 0.65
ASIC1P78348 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ASIC1P78348 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.14■□□□□ 0.65
ASIC1P78348 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.14■□□□□ 0.65
ASIC1P78348 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ASIC1P78348 NKAPP1-205ENST00000585790 367 ntBASIC19.14■□□□□ 0.65
ASIC1P78348 CLEC4GP1-201ENST00000596555 870 ntBASIC19.14■□□□□ 0.65
ASIC1P78348 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.14■□□□□ 0.65
ASIC1P78348 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ASIC1P78348 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ASIC1P78348 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
ASIC1P78348 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ASIC1P78348 AL356309.3-201ENST00000624132 1934 ntBASIC19.13■□□□□ 0.65
ASIC1P78348 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ASIC1P78348 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.13■□□□□ 0.65
ASIC1P78348 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.13■□□□□ 0.65
ASIC1P78348 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ASIC1P78348 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms