Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 AC046158.3-201ENST00000624947 2558 ntBASIC16.74■□□□□ 0.27
YBX1P67809 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 RPS2P1-201ENST00000434010 821 ntBASIC16.74■□□□□ 0.27
YBX1P67809 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 AL049840.3-201ENST00000602669 611 ntBASIC16.74■□□□□ 0.27
YBX1P67809 AL139288.1-201ENST00000623748 933 ntBASIC16.74■□□□□ 0.27
YBX1P67809 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
YBX1P67809 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
YBX1P67809 LINC02199-201ENST00000506655 2702 ntBASIC16.74■□□□□ 0.27
YBX1P67809 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.74■□□□□ 0.27
YBX1P67809 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
YBX1P67809 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 AC097637.2-201ENST00000624096 1997 ntBASIC16.73■□□□□ 0.27
YBX1P67809 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
YBX1P67809 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.73■□□□□ 0.27
YBX1P67809 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
YBX1P67809 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.73■□□□□ 0.27
YBX1P67809 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 SLC25A1P3-201ENST00000395415 828 ntBASIC16.73■□□□□ 0.27
YBX1P67809 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.73■□□□□ 0.27
YBX1P67809 SIGLEC30P-201ENST00000455569 941 ntBASIC16.73■□□□□ 0.27
YBX1P67809 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.73■□□□□ 0.27
YBX1P67809 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.73■□□□□ 0.27
YBX1P67809 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.73■□□□□ 0.27
YBX1P67809 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.73■□□□□ 0.27
YBX1P67809 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
YBX1P67809 SLC25A6P4-201ENST00000586535 553 ntBASIC16.73■□□□□ 0.27
YBX1P67809 AL022326.1-202ENST00000641533 845 ntBASIC16.73■□□□□ 0.27
YBX1P67809 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.73■□□□□ 0.27
YBX1P67809 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
YBX1P67809 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
YBX1P67809 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.73■□□□□ 0.27
YBX1P67809 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
YBX1P67809 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
YBX1P67809 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
YBX1P67809 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 AC008741.2-201ENST00000612792 3115 ntBASIC16.72■□□□□ 0.27
YBX1P67809 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
YBX1P67809 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
YBX1P67809 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
YBX1P67809 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.72■□□□□ 0.27
YBX1P67809 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.72■□□□□ 0.27
YBX1P67809 PRYP5-201ENST00000451909 266 ntBASIC16.72■□□□□ 0.27
YBX1P67809 AC018712.1-201ENST00000455767 687 ntBASIC16.72■□□□□ 0.27
YBX1P67809 RNA5SP419-201ENST00000515908 135 ntBASIC16.72■□□□□ 0.27
YBX1P67809 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms