Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.92■□□□□ 0.94
PDE1AP54750 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.92■□□□□ 0.94
PDE1AP54750 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.92■□□□□ 0.94
PDE1AP54750 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.92■□□□□ 0.94
PDE1AP54750 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.92■□□□□ 0.94
PDE1AP54750 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.92■□□□□ 0.94
PDE1AP54750 AL121912.1-201ENST00000603683 238 ntBASIC20.92■□□□□ 0.94
PDE1AP54750 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE1AP54750 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE1AP54750 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PDE1AP54750 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE1AP54750 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDE1AP54750 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
PDE1AP54750 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 AL645728.1-201ENST00000366221 2101 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PDE1AP54750 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDE1AP54750 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDE1AP54750 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDE1AP54750 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
PDE1AP54750 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE1AP54750 ELK2BP-201ENST00000415014 1224 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 LAGE3P1-201ENST00000425356 484 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 RPS2P1-201ENST00000434010 821 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 AC079781.3-201ENST00000449110 356 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 PAWRP1-201ENST00000451083 565 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE1AP54750 RNPS1P1-201ENST00000507437 918 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.91■□□□□ 0.94
PDE1AP54750 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.91■□□□□ 0.94
PDE1AP54750 RN7SL510P-201ENST00000581311 263 ntBASIC20.91■□□□□ 0.94
PDE1AP54750 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.91■□□□□ 0.94
PDE1AP54750 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.91■□□□□ 0.94
PDE1AP54750 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.91■□□□□ 0.94
PDE1AP54750 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.91■□□□□ 0.94
PDE1AP54750 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDE1AP54750 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.91■□□□□ 0.94
PDE1AP54750 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PDE1AP54750 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.9■□□□□ 0.94
PDE1AP54750 PTCHD3P3-201ENST00000403073 906 ntBASIC20.9■□□□□ 0.94
PDE1AP54750 KRT18P27-201ENST00000427733 1299 ntBASIC20.9■□□□□ 0.94
PDE1AP54750 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE1AP54750 HNRNPDP1-201ENST00000439535 754 ntBASIC20.9■□□□□ 0.94
PDE1AP54750 AC018712.1-201ENST00000455767 687 ntBASIC20.9■□□□□ 0.94
PDE1AP54750 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE1AP54750 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
PDE1AP54750 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PDE1AP54750 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.9■□□□□ 0.94
PDE1AP54750 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDE1AP54750 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PDE1AP54750 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDE1AP54750 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PDE1AP54750 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE1AP54750 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.89■□□□□ 0.94
PDE1AP54750 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.89■□□□□ 0.94
PDE1AP54750 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDE1AP54750 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PDE1AP54750 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms