Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 LINC00982-205ENST00000420957 435 ntBASIC16.68■□□□□ 0.26
PDX1P52945 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.68■□□□□ 0.26
PDX1P52945 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.68■□□□□ 0.26
PDX1P52945 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.68■□□□□ 0.26
PDX1P52945 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PDX1P52945 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PDX1P52945 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.68■□□□□ 0.26
PDX1P52945 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.68■□□□□ 0.26
PDX1P52945 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.68■□□□□ 0.26
PDX1P52945 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.68■□□□□ 0.26
PDX1P52945 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PDX1P52945 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.67■□□□□ 0.26
PDX1P52945 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
PDX1P52945 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PDX1P52945 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.67■□□□□ 0.26
PDX1P52945 RHOQP3-201ENST00000437982 621 ntBASIC16.67■□□□□ 0.26
PDX1P52945 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 CEND1P1-201ENST00000451006 455 ntBASIC16.67■□□□□ 0.26
PDX1P52945 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.67■□□□□ 0.26
PDX1P52945 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PDX1P52945 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 BCAR1-209ENST00000546196 1340 ntBASIC16.67■□□□□ 0.26
PDX1P52945 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PDX1P52945 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
PDX1P52945 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PDX1P52945 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.66■□□□□ 0.26
PDX1P52945 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.66■□□□□ 0.26
PDX1P52945 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.66■□□□□ 0.26
PDX1P52945 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 AC116407.2-201ENST00000613639 860 ntBASIC16.66■□□□□ 0.26
PDX1P52945 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.66■□□□□ 0.26
PDX1P52945 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDX1P52945 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.65■□□□□ 0.26
PDX1P52945 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PDX1P52945 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PDX1P52945 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDX1P52945 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
PDX1P52945 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.65■□□□□ 0.26
PDX1P52945 IGHV3-52-201ENST00000519770 353 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms