Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLCN4P51793 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLCN4P51793 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN4P51793 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN4P51793 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN4P51793 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN4P51793 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLCN4P51793 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN4P51793 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
CLCN4P51793 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 LYSMD4-203ENST00000378904 2122 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 HMGA1P7-201ENST00000406908 502 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 GPS2P2-201ENST00000430745 888 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN4P51793 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN4P51793 RNA5SP421-201ENST00000516864 134 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN4P51793 DUX4L17-201ENST00000557360 1267 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 AC051619.7-201ENST00000568314 623 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN4P51793 AJ011932.1-201ENST00000621707 465 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 AC068880.1-201ENST00000507289 2297 ntBASIC17.97■□□□□ 0.47
CLCN4P51793 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN4P51793 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCN4P51793 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN4P51793 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN4P51793 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLCN4P51793 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN4P51793 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN4P51793 AC093214.1-201ENST00000511688 1107 ntBASIC17.96■□□□□ 0.47
CLCN4P51793 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN4P51793 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN4P51793 AP001059.3-201ENST00000619053 235 ntBASIC17.96■□□□□ 0.47
CLCN4P51793 AL161645.1-201ENST00000622716 1255 ntBASIC17.96■□□□□ 0.47
CLCN4P51793 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN4P51793 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLCN4P51793 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLCN4P51793 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN4P51793 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN4P51793 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN4P51793 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN4P51793 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN4P51793 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN4P51793 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN4P51793 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 SPCS2P4-201ENST00000436160 681 ntBASIC17.95■□□□□ 0.46
CLCN4P51793 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 AC069262.1-201ENST00000539058 672 ntBASIC17.95■□□□□ 0.46
CLCN4P51793 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN4P51793 AC005412.3-201ENST00000580309 715 ntBASIC17.95■□□□□ 0.46
CLCN4P51793 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN4P51793 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN4P51793 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN4P51793 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN4P51793 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms