Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCR9P51686 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
CCR9P51686 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCR9P51686 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CCR9P51686 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCR9P51686 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.16■□□□□ 0.02
CCR9P51686 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 VENTXP5-201ENST00000523979 775 ntBASIC15.15■□□□□ 0.02
CCR9P51686 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.15■□□□□ 0.02
CCR9P51686 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.15■□□□□ 0.02
CCR9P51686 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 AC012306.2-201ENST00000609350 630 ntBASIC15.15■□□□□ 0.02
CCR9P51686 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 AC103702.1-201ENST00000548801 2630 ntBASIC15.15■□□□□ 0.02
CCR9P51686 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
CCR9P51686 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCR9P51686 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.15■□□□□ 0.02
CCR9P51686 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCR9P51686 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.14■□□□□ 0.01
CCR9P51686 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 AC092068.3-201ENST00000587894 2016 ntBASIC15.14■□□□□ 0.01
CCR9P51686 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 AC006449.5-201ENST00000610658 2098 ntBASIC15.14■□□□□ 0.01
CCR9P51686 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 AL138831.2-201ENST00000606564 490 ntBASIC15.14■□□□□ 0.01
CCR9P51686 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCR9P51686 AC097493.4-201ENST00000641197 219 ntBASIC15.14■□□□□ 0.01
CCR9P51686 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.14■□□□□ 0.01
CCR9P51686 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CCR9P51686 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCR9P51686 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.13■□□□□ 0.01
CCR9P51686 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.13■□□□□ 0.01
CCR9P51686 FAM220CP-201ENST00000395253 831 ntBASIC15.13■□□□□ 0.01
CCR9P51686 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCR9P51686 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms