Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
KNTC1P50748 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
KNTC1P50748 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
KNTC1P50748 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.23■□□□□ 0.19
KNTC1P50748 SERBP1P5-201ENST00000510079 1181 ntBASIC16.23■□□□□ 0.19
KNTC1P50748 AL161645.1-201ENST00000622716 1255 ntBASIC16.23■□□□□ 0.19
KNTC1P50748 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KNTC1P50748 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KNTC1P50748 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
KNTC1P50748 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.22■□□□□ 0.19
KNTC1P50748 ACA64.2-201ENST00000459014 129 ntBASIC16.22■□□□□ 0.19
KNTC1P50748 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 AC069120.2-201ENST00000524091 540 ntBASIC16.22■□□□□ 0.19
KNTC1P50748 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.22■□□□□ 0.19
KNTC1P50748 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.22■□□□□ 0.19
KNTC1P50748 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
KNTC1P50748 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.22■□□□□ 0.19
KNTC1P50748 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.22■□□□□ 0.19
KNTC1P50748 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.22■□□□□ 0.19
KNTC1P50748 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 SPDYE14P-201ENST00000442619 822 ntBASIC16.22■□□□□ 0.19
KNTC1P50748 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KNTC1P50748 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.22■□□□□ 0.19
KNTC1P50748 AC107918.2-201ENST00000530817 355 ntBASIC16.22■□□□□ 0.19
KNTC1P50748 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.22■□□□□ 0.19
KNTC1P50748 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.22■□□□□ 0.19
KNTC1P50748 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.22■□□□□ 0.19
KNTC1P50748 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KNTC1P50748 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
KNTC1P50748 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
KNTC1P50748 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.21■□□□□ 0.19
KNTC1P50748 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 RN7SL589P-201ENST00000481268 310 ntBASIC16.21■□□□□ 0.19
KNTC1P50748 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.21■□□□□ 0.19
KNTC1P50748 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.21■□□□□ 0.19
KNTC1P50748 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
KNTC1P50748 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KNTC1P50748 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KNTC1P50748 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.21■□□□□ 0.18
KNTC1P50748 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KNTC1P50748 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
KNTC1P50748 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.21■□□□□ 0.18
KNTC1P50748 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KNTC1P50748 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
KNTC1P50748 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.21■□□□□ 0.18
KNTC1P50748 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
KNTC1P50748 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.21■□□□□ 0.18
KNTC1P50748 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms