Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 AC105021.1-202ENST00000570572 669 ntBASIC19.32■□□□□ 0.68
TM4SF4P48230 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
TM4SF4P48230 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.32■□□□□ 0.68
TM4SF4P48230 AC007431.3-201ENST00000623221 587 ntBASIC19.32■□□□□ 0.68
TM4SF4P48230 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF4P48230 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.32■□□□□ 0.68
TM4SF4P48230 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 FLJ13224-201ENST00000313737 1514 ntBASIC19.31■□□□□ 0.68
TM4SF4P48230 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.31■□□□□ 0.68
TM4SF4P48230 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF4P48230 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.31■□□□□ 0.68
TM4SF4P48230 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.31■□□□□ 0.68
TM4SF4P48230 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.31■□□□□ 0.68
TM4SF4P48230 MPDU1-223ENST00000582151 728 ntBASIC19.31■□□□□ 0.68
TM4SF4P48230 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.31■□□□□ 0.68
TM4SF4P48230 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF4P48230 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF4P48230 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF4P48230 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF4P48230 LINC00895-201ENST00000629028 1637 ntBASIC19.3■□□□□ 0.68
TM4SF4P48230 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF4P48230 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TM4SF4P48230 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF4P48230 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF4P48230 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 MIR6775-201ENST00000617557 69 ntBASIC19.3■□□□□ 0.68
TM4SF4P48230 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF4P48230 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF4P48230 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF4P48230 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF4P48230 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF4P48230 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.29■□□□□ 0.68
TM4SF4P48230 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
TM4SF4P48230 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.29■□□□□ 0.68
TM4SF4P48230 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.29■□□□□ 0.68
TM4SF4P48230 KRT223P-202ENST00000449164 1292 ntBASIC19.29■□□□□ 0.68
TM4SF4P48230 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.29■□□□□ 0.68
TM4SF4P48230 PRYP6-201ENST00000514804 343 ntBASIC19.29■□□□□ 0.68
TM4SF4P48230 LINC00896-202ENST00000609602 2128 ntBASIC19.29■□□□□ 0.68
TM4SF4P48230 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.29■□□□□ 0.68
TM4SF4P48230 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TM4SF4P48230 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF4P48230 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TM4SF4P48230 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TM4SF4P48230 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TM4SF4P48230 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF4P48230 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF4P48230 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF4P48230 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF4P48230 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF4P48230 AC133552.6-201ENST00000613406 534 ntBASIC19.28■□□□□ 0.68
TM4SF4P48230 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TM4SF4P48230 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF4P48230 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
TM4SF4P48230 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.28■□□□□ 0.68
TM4SF4P48230 LYSMD4-203ENST00000378904 2122 ntBASIC19.28■□□□□ 0.68
TM4SF4P48230 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF4P48230 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms