Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC1A2P43004 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A2P43004 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 AP005117.1-201ENST00000584346 1413 ntBASIC17.11■□□□□ 0.33
SLC1A2P43004 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A2P43004 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A2P43004 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A2P43004 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A2P43004 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC1A2P43004 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC1A2P43004 LINC00982-205ENST00000420957 435 ntBASIC17.1■□□□□ 0.33
SLC1A2P43004 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC1A2P43004 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 AL732292.2-201ENST00000609649 430 ntBASIC17.1■□□□□ 0.33
SLC1A2P43004 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A2P43004 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC1A2P43004 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A2P43004 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A2P43004 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 PCDHB17P-201ENST00000539533 2393 ntBASIC17.09■□□□□ 0.33
SLC1A2P43004 AC092171.3-201ENST00000610122 2651 ntBASIC17.09■□□□□ 0.33
SLC1A2P43004 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC1A2P43004 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC1A2P43004 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A2P43004 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A2P43004 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A2P43004 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A2P43004 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC1A2P43004 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC1A2P43004 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A2P43004 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A2P43004 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms