Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 GPR89P-201ENST00000407924 1495 ntBASIC16.24■□□□□ 0.19
CDKN2CP42773 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDKN2CP42773 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.24■□□□□ 0.19
CDKN2CP42773 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.24■□□□□ 0.19
CDKN2CP42773 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 AL121672.3-201ENST00000608644 468 ntBASIC16.24■□□□□ 0.19
CDKN2CP42773 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 AL121956.5-201ENST00000625261 221 ntBASIC16.24■□□□□ 0.19
CDKN2CP42773 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.24■□□□□ 0.19
CDKN2CP42773 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.24■□□□□ 0.19
CDKN2CP42773 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDKN2CP42773 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDKN2CP42773 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.23■□□□□ 0.19
CDKN2CP42773 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
CDKN2CP42773 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 VENTXP7-201ENST00000475503 772 ntBASIC16.23■□□□□ 0.19
CDKN2CP42773 FAM86EP-206ENST00000510506 987 ntBASIC16.23■□□□□ 0.19
CDKN2CP42773 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.23■□□□□ 0.19
CDKN2CP42773 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.23■□□□□ 0.19
CDKN2CP42773 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDKN2CP42773 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 AC233702.3-201ENST00000578656 1387 ntBASIC16.23■□□□□ 0.19
CDKN2CP42773 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDKN2CP42773 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 AC148477.5-201ENST00000625164 1645 ntBASIC16.23■□□□□ 0.19
CDKN2CP42773 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDKN2CP42773 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKN2CP42773 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKN2CP42773 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.22■□□□□ 0.19
CDKN2CP42773 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKN2CP42773 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms