Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.3■□□□□ 0.36
CCNFP41002 AP000867.3-201ENST00000524675 377 ntBASIC17.3■□□□□ 0.36
CCNFP41002 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCNFP41002 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.3■□□□□ 0.36
CCNFP41002 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCNFP41002 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 AC092068.3-201ENST00000587894 2016 ntBASIC17.3■□□□□ 0.36
CCNFP41002 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCNFP41002 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 EGFEM1P-202ENST00000431685 1563 ntBASIC17.29■□□□□ 0.36
CCNFP41002 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCNFP41002 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCNFP41002 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNFP41002 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNFP41002 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.29■□□□□ 0.36
CCNFP41002 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCNFP41002 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 AC074051.2-201ENST00000565115 352 ntBASIC17.29■□□□□ 0.36
CCNFP41002 AP005901.3-202ENST00000581653 237 ntBASIC17.29■□□□□ 0.36
CCNFP41002 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCNFP41002 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CCNFP41002 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCNFP41002 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCNFP41002 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
CCNFP41002 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
CCNFP41002 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
CCNFP41002 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCNFP41002 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.28■□□□□ 0.36
CCNFP41002 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.28■□□□□ 0.36
CCNFP41002 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.28■□□□□ 0.36
CCNFP41002 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.28■□□□□ 0.36
CCNFP41002 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNFP41002 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNFP41002 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNFP41002 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CCNFP41002 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNFP41002 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms