Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.03□□□□□ -0.16
CEACAM3P40198 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.03□□□□□ -0.16
CEACAM3P40198 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 SART3-203ENST00000546611 1184 ntBASIC14.03□□□□□ -0.16
CEACAM3P40198 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.03□□□□□ -0.16
CEACAM3P40198 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CEACAM3P40198 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CEACAM3P40198 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.03□□□□□ -0.16
CEACAM3P40198 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CEACAM3P40198 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CEACAM3P40198 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CEACAM3P40198 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.02□□□□□ -0.16
CEACAM3P40198 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.02□□□□□ -0.17
CEACAM3P40198 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.02□□□□□ -0.17
CEACAM3P40198 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.02□□□□□ -0.17
CEACAM3P40198 LAGE3P1-201ENST00000425356 484 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 KRT18P67-201ENST00000432816 1264 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.02□□□□□ -0.17
CEACAM3P40198 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CEACAM3P40198 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 AC093909.1-201ENST00000504731 1122 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.02□□□□□ -0.17
CEACAM3P40198 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.02□□□□□ -0.17
CEACAM3P40198 OR7E14P-202ENST00000530490 1290 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.02□□□□□ -0.17
CEACAM3P40198 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 AL662844.1-201ENST00000546340 181 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.02□□□□□ -0.17
CEACAM3P40198 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.02□□□□□ -0.17
CEACAM3P40198 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 AC012313.1-201ENST00000593393 3059 ntBASIC14.02□□□□□ -0.17
CEACAM3P40198 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CEACAM3P40198 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CEACAM3P40198 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CEACAM3P40198 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CEACAM3P40198 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CEACAM3P40198 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CEACAM3P40198 CROCCP2-202ENST00000412962 2773 ntBASIC14.01□□□□□ -0.17
CEACAM3P40198 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms