Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC00304-203ENST00000565008 1864 ntBASIC20.95■□□□□ 0.94
PDE6BP35913 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.95■□□□□ 0.94
PDE6BP35913 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE6BP35913 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE6BP35913 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.95■□□□□ 0.94
PDE6BP35913 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 AL138918.1-201ENST00000568306 659 ntBASIC20.95■□□□□ 0.94
PDE6BP35913 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PDE6BP35913 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 AP000974.1-201ENST00000623909 2387 ntBASIC20.95■□□□□ 0.94
PDE6BP35913 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.95■□□□□ 0.94
PDE6BP35913 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDE6BP35913 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PDE6BP35913 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 SPTLC1P1-201ENST00000447199 261 ntBASIC20.94■□□□□ 0.94
PDE6BP35913 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 RARRES2P9-201ENST00000565168 469 ntBASIC20.94■□□□□ 0.94
PDE6BP35913 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PDE6BP35913 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PDE6BP35913 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDE6BP35913 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.93■□□□□ 0.94
PDE6BP35913 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.93■□□□□ 0.94
PDE6BP35913 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE6BP35913 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 HLA-V-201ENST00000429037 534 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE6BP35913 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE6BP35913 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE6BP35913 AC003101.2-201ENST00000612557 442 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 AC007967.4-201ENST00000614700 386 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 SPDYE12P-201ENST00000618416 771 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 CU639417.3-201ENST00000624240 1404 ntBASIC20.93■□□□□ 0.94
PDE6BP35913 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.93■□□□□ 0.94
PDE6BP35913 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.93■□□□□ 0.94
PDE6BP35913 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.93■□□□□ 0.94
PDE6BP35913 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDE6BP35913 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
PDE6BP35913 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.92■□□□□ 0.94
PDE6BP35913 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDE6BP35913 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms