Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS2P33552 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS2P33552 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS2P33552 WWOX-216ENST00000569818 525 ntBASIC12.68□□□□□ -0.38
CKS2P33552 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.68□□□□□ -0.38
CKS2P33552 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 AL139327.4-201ENST00000612362 153 ntBASIC12.68□□□□□ -0.38
CKS2P33552 CR769767.2-201ENST00000622735 460 ntBASIC12.68□□□□□ -0.38
CKS2P33552 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CKS2P33552 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CKS2P33552 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.68□□□□□ -0.38
CKS2P33552 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CKS2P33552 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 PCDHA3-202ENST00000532566 4594 ntBASIC12.67□□□□□ -0.38
CKS2P33552 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.67□□□□□ -0.38
CKS2P33552 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.67□□□□□ -0.38
CKS2P33552 AC005104.2-201ENST00000427818 678 ntBASIC12.67□□□□□ -0.38
CKS2P33552 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.67□□□□□ -0.38
CKS2P33552 AC097488.1-201ENST00000507834 756 ntBASIC12.67□□□□□ -0.38
CKS2P33552 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 AF186192.3-201ENST00000583427 947 ntBASIC12.67□□□□□ -0.38
CKS2P33552 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.67□□□□□ -0.38
CKS2P33552 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.67□□□□□ -0.38
CKS2P33552 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.67□□□□□ -0.38
CKS2P33552 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 OR2I1P-210ENST00000642037 4691 ntBASIC12.67□□□□□ -0.38
CKS2P33552 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CKS2P33552 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.67□□□□□ -0.38
CKS2P33552 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CKS2P33552 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms