Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GDF1P27539 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
GDF1P27539 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
GDF1P27539 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GDF1P27539 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.55■□□□□ 0.08
GDF1P27539 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.55■□□□□ 0.08
GDF1P27539 AC018845.2-201ENST00000568326 409 ntBASIC15.55■□□□□ 0.08
GDF1P27539 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
GDF1P27539 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GDF1P27539 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
GDF1P27539 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GDF1P27539 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GDF1P27539 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
GDF1P27539 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.54■□□□□ 0.08
GDF1P27539 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
GDF1P27539 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
GDF1P27539 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 KRT18P2-201ENST00000447938 1258 ntBASIC15.54■□□□□ 0.08
GDF1P27539 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GDF1P27539 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.54■□□□□ 0.08
GDF1P27539 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GDF1P27539 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
GDF1P27539 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.53■□□□□ 0.08
GDF1P27539 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
GDF1P27539 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 MIR1233-2-201ENST00000408138 82 ntBASIC15.53■□□□□ 0.08
GDF1P27539 MIR1233-1-201ENST00000408722 82 ntBASIC15.53■□□□□ 0.08
GDF1P27539 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.53■□□□□ 0.08
GDF1P27539 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
GDF1P27539 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
GDF1P27539 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.53■□□□□ 0.08
GDF1P27539 GPALPP1-207ENST00000611650 899 ntBASIC15.53■□□□□ 0.08
GDF1P27539 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
GDF1P27539 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.53■□□□□ 0.08
GDF1P27539 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
GDF1P27539 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
GDF1P27539 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
GDF1P27539 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.53■□□□□ 0.08
GDF1P27539 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
GDF1P27539 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
GDF1P27539 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 AC002310.6-201ENST00000624451 1377 ntBASIC15.52■□□□□ 0.08
GDF1P27539 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.52■□□□□ 0.08
GDF1P27539 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
GDF1P27539 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms