Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.2□□□□□ -0.14
APCP25054 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
APCP25054 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 AL353705.2-201ENST00000428243 662 ntBASIC14.2□□□□□ -0.14
APCP25054 MTND6P24-201ENST00000440466 518 ntBASIC14.2□□□□□ -0.14
APCP25054 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.2□□□□□ -0.14
APCP25054 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
APCP25054 AL079307.3-201ENST00000556114 283 ntBASIC14.2□□□□□ -0.14
APCP25054 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
APCP25054 AC103810.3-201ENST00000583567 96 ntBASIC14.2□□□□□ -0.14
APCP25054 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.2□□□□□ -0.14
APCP25054 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.2□□□□□ -0.14
APCP25054 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
APCP25054 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APCP25054 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.2□□□□□ -0.14
APCP25054 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.2□□□□□ -0.14
APCP25054 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.2□□□□□ -0.14
APCP25054 MIR6727-201ENST00000620702 65 ntBASIC14.2□□□□□ -0.14
APCP25054 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APCP25054 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.2□□□□□ -0.14
APCP25054 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APCP25054 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 BRWD1P1-201ENST00000401091 371 ntBASIC14.19□□□□□ -0.14
APCP25054 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.19□□□□□ -0.14
APCP25054 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.19□□□□□ -0.14
APCP25054 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.19□□□□□ -0.14
APCP25054 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.19□□□□□ -0.14
APCP25054 AL035456.1-201ENST00000456064 1369 ntBASIC14.19□□□□□ -0.14
APCP25054 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
APCP25054 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.19□□□□□ -0.14
APCP25054 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.19□□□□□ -0.14
APCP25054 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.19□□□□□ -0.14
APCP25054 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APCP25054 AC023310.3-201ENST00000557027 670 ntBASIC14.19□□□□□ -0.14
APCP25054 AC100756.1-201ENST00000562736 682 ntBASIC14.19□□□□□ -0.14
APCP25054 AC138749.3-201ENST00000567691 622 ntBASIC14.19□□□□□ -0.14
APCP25054 AC116165.1-201ENST00000611806 668 ntBASIC14.19□□□□□ -0.14
APCP25054 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.19□□□□□ -0.14
APCP25054 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
APCP25054 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.19□□□□□ -0.14
APCP25054 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.19□□□□□ -0.14
APCP25054 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.19□□□□□ -0.14
APCP25054 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APCP25054 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.19□□□□□ -0.14
APCP25054 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.19□□□□□ -0.14
APCP25054 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
APCP25054 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.19□□□□□ -0.14
APCP25054 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.18□□□□□ -0.14
APCP25054 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.18□□□□□ -0.14
APCP25054 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APCP25054 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APCP25054 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APCP25054 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APCP25054 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APCP25054 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APCP25054 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.18□□□□□ -0.14
APCP25054 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
APCP25054 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms