Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFRAP16234 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFRAP16234 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFRAP16234 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 NCF1C-201ENST00000438382 1427 ntBASIC18.02■□□□□ 0.48
PDGFRAP16234 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.02■□□□□ 0.48
PDGFRAP16234 AC073648.2-201ENST00000510116 352 ntBASIC18.02■□□□□ 0.48
PDGFRAP16234 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.02■□□□□ 0.48
PDGFRAP16234 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFRAP16234 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFRAP16234 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
PDGFRAP16234 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFRAP16234 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.02■□□□□ 0.48
PDGFRAP16234 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFRAP16234 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFRAP16234 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFRAP16234 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFRAP16234 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFRAP16234 AD000864.1-201ENST00000624076 2295 ntBASIC18.01■□□□□ 0.47
PDGFRAP16234 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.01■□□□□ 0.47
PDGFRAP16234 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFRAP16234 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFRAP16234 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 RNPS1P1-201ENST00000507437 918 ntBASIC18.01■□□□□ 0.47
PDGFRAP16234 AC079776.4-201ENST00000511039 504 ntBASIC18.01■□□□□ 0.47
PDGFRAP16234 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFRAP16234 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.01■□□□□ 0.47
PDGFRAP16234 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFRAP16234 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFRAP16234 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 AL589182.2-201ENST00000619332 1049 ntBASIC18.01■□□□□ 0.47
PDGFRAP16234 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PDGFRAP16234 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PDGFRAP16234 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFRAP16234 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFRAP16234 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PDGFRAP16234 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18■□□□□ 0.47
PDGFRAP16234 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18■□□□□ 0.47
PDGFRAP16234 PRORSD1P-202ENST00000563365 2154 ntBASIC18■□□□□ 0.47
PDGFRAP16234 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18■□□□□ 0.47
PDGFRAP16234 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18■□□□□ 0.47
PDGFRAP16234 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18■□□□□ 0.47
PDGFRAP16234 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18■□□□□ 0.47
PDGFRAP16234 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFRAP16234 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18■□□□□ 0.47
PDGFRAP16234 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18■□□□□ 0.47
PDGFRAP16234 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18■□□□□ 0.47
PDGFRAP16234 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDGFRAP16234 AC021087.4-201ENST00000563761 564 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms