Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.71■□□□□ 0.75
BMP3P12645 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BMP3P12645 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
BMP3P12645 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BMP3P12645 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BMP3P12645 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.7■□□□□ 0.74
BMP3P12645 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.7■□□□□ 0.74
BMP3P12645 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 AC002056.1-201ENST00000395613 760 ntBASIC19.7■□□□□ 0.74
BMP3P12645 AC140658.5-201ENST00000438532 169 ntBASIC19.7■□□□□ 0.74
BMP3P12645 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.7■□□□□ 0.74
BMP3P12645 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
BMP3P12645 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
BMP3P12645 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BMP3P12645 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.7■□□□□ 0.74
BMP3P12645 KRT18P28-201ENST00000453838 1332 ntBASIC19.7■□□□□ 0.74
BMP3P12645 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.7■□□□□ 0.74
BMP3P12645 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.7■□□□□ 0.74
BMP3P12645 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
BMP3P12645 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
BMP3P12645 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.69■□□□□ 0.74
BMP3P12645 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
BMP3P12645 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.69■□□□□ 0.74
BMP3P12645 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.69■□□□□ 0.74
BMP3P12645 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.69■□□□□ 0.74
BMP3P12645 HMGA1P7-201ENST00000406908 502 ntBASIC19.69■□□□□ 0.74
BMP3P12645 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
BMP3P12645 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
BMP3P12645 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.69■□□□□ 0.74
BMP3P12645 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.69■□□□□ 0.74
BMP3P12645 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.69■□□□□ 0.74
BMP3P12645 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.69■□□□□ 0.74
BMP3P12645 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.69■□□□□ 0.74
BMP3P12645 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BMP3P12645 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
BMP3P12645 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 CROCCP2-202ENST00000412962 2773 ntBASIC19.68■□□□□ 0.74
BMP3P12645 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 AP000344.2-201ENST00000512987 629 ntBASIC19.68■□□□□ 0.74
BMP3P12645 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.68■□□□□ 0.74
BMP3P12645 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BMP3P12645 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 TOP3BP1-201ENST00000420768 1380 ntBASIC19.68■□□□□ 0.74
BMP3P12645 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
BMP3P12645 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
BMP3P12645 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
BMP3P12645 AL353732.1-201ENST00000569618 1459 ntBASIC19.67■□□□□ 0.74
BMP3P12645 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BMP3P12645 FRMD8P1-201ENST00000440433 1524 ntBASIC19.67■□□□□ 0.74
BMP3P12645 AC012569.1-201ENST00000591191 1524 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms