Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 AC084018.2-201ENST00000613093 2607 ntBASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 AC005104.2-201ENST00000427818 678 ntBASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 AL353593.2-201ENST00000602529 1483 ntBASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
CCNYL3P0C7X3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 UPF3AP3-201ENST00000420996 769 ntBASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AC007967.2-201ENST00000432613 625 ntBASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AC009947.1-201ENST00000444350 727 ntBASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCNYL3P0C7X3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 AC003669.1-201ENST00000334569 611 ntBASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 KLF4P1-201ENST00000412782 1185 ntBASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 KRT18P27-201ENST00000427733 1299 ntBASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 IGHV3-52-201ENST00000519770 353 ntBASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.59■□□□□ 0.25
CCNYL3P0C7X3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms