Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SFTPBP07988 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 KRT18P1-202ENST00000452408 1331 ntBASIC14.97□□□□□ -0.01
SFTPBP07988 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.97□□□□□ -0.01
SFTPBP07988 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.97□□□□□ -0.01
SFTPBP07988 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.97□□□□□ -0.01
SFTPBP07988 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SFTPBP07988 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 AC096633.1-201ENST00000422446 749 ntBASIC14.97□□□□□ -0.01
SFTPBP07988 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.97□□□□□ -0.01
SFTPBP07988 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 CLEC4GP1-201ENST00000596555 870 ntBASIC14.97□□□□□ -0.01
SFTPBP07988 AC012313.10-201ENST00000623509 926 ntBASIC14.97□□□□□ -0.01
SFTPBP07988 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
SFTPBP07988 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SFTPBP07988 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.97□□□□□ -0.01
SFTPBP07988 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.97□□□□□ -0.01
SFTPBP07988 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SFTPBP07988 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.96□□□□□ -0.01
SFTPBP07988 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.96□□□□□ -0.01
SFTPBP07988 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SFTPBP07988 MIR3180-1-201ENST00000580374 94 ntBASIC14.96□□□□□ -0.01
SFTPBP07988 MIR3180-3-201ENST00000584616 94 ntBASIC14.96□□□□□ -0.01
SFTPBP07988 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.96□□□□□ -0.01
SFTPBP07988 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.96□□□□□ -0.01
SFTPBP07988 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SFTPBP07988 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SFTPBP07988 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.96□□□□□ -0.02
SFTPBP07988 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.96□□□□□ -0.02
SFTPBP07988 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SFTPBP07988 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SFTPBP07988 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SFTPBP07988 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.95□□□□□ -0.02
SFTPBP07988 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.95□□□□□ -0.02
SFTPBP07988 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.95□□□□□ -0.02
SFTPBP07988 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
SFTPBP07988 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
SFTPBP07988 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.95□□□□□ -0.02
SFTPBP07988 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SFTPBP07988 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SFTPBP07988 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms