Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
HLA-DQB2P05538 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DQB2P05538 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 PRORSD1P-202ENST00000563365 2154 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC105020.1-201ENST00000435356 2205 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC073621.1-201ENST00000392730 636 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 MRPL3P1-201ENST00000400109 1033 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 PTCHD3P3-201ENST00000403073 906 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 DUX4L17-201ENST00000557360 1267 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC008735.5-201ENST00000623544 497 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.37
HLA-DQB2P05538 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DQB2P05538 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 TPM4P1-201ENST00000436100 807 ntBASIC17.38■□□□□ 0.37
HLA-DQB2P05538 AC009078.2-202ENST00000463353 338 ntBASIC17.38■□□□□ 0.37
HLA-DQB2P05538 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 AL049840.3-201ENST00000602669 611 ntBASIC17.38■□□□□ 0.37
HLA-DQB2P05538 MIR7706-201ENST00000613747 67 ntBASIC17.38■□□□□ 0.37
HLA-DQB2P05538 FAM215A-202ENST00000632077 792 ntBASIC17.38■□□□□ 0.37
HLA-DQB2P05538 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DQB2P05538 AP002414.3-201ENST00000589352 1468 ntBASIC17.37■□□□□ 0.37
HLA-DQB2P05538 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 SLC25A6P4-201ENST00000586535 553 ntBASIC17.37■□□□□ 0.37
HLA-DQB2P05538 TERC-201ENST00000602385 541 ntBASIC17.37■□□□□ 0.37
HLA-DQB2P05538 AL773604.1-201ENST00000617417 272 ntBASIC17.37■□□□□ 0.37
HLA-DQB2P05538 AL805961.1-202ENST00000641562 540 ntBASIC17.37■□□□□ 0.37
HLA-DQB2P05538 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HLA-DQB2P05538 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms