Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC044860.1-202ENST00000559481 777 ntBASIC10.54□□□□□ -0.72
APOBP04114 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC10.54□□□□□ -0.72
APOBP04114 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
APOBP04114 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC10.54□□□□□ -0.72
APOBP04114 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.54□□□□□ -0.72
APOBP04114 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC10.54□□□□□ -0.72
APOBP04114 AC005412.3-201ENST00000580309 715 ntBASIC10.54□□□□□ -0.72
APOBP04114 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.54□□□□□ -0.72
APOBP04114 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.54□□□□□ -0.72
APOBP04114 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC10.54□□□□□ -0.72
APOBP04114 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
APOBP04114 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.53□□□□□ -0.72
APOBP04114 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC10.53□□□□□ -0.72
APOBP04114 CROCCP4-201ENST00000457096 498 ntBASIC10.53□□□□□ -0.72
APOBP04114 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.53□□□□□ -0.72
APOBP04114 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 AL589739.1-201ENST00000607720 493 ntBASIC10.53□□□□□ -0.72
APOBP04114 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 AC098850.1-201ENST00000419919 790 ntBASIC10.53□□□□□ -0.72
APOBP04114 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 CD81-207ENST00000481687 890 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC10.53□□□□□ -0.72
APOBP04114 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 AC234783.1-201ENST00000441761 496 ntBASIC10.53□□□□□ -0.72
APOBP04114 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC10.53□□□□□ -0.72
APOBP04114 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.53□□□□□ -0.72
APOBP04114 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOBP04114 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC10.53□□□□□ -0.72
APOBP04114 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOBP04114 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
APOBP04114 AC073439.1-201ENST00000624121 1774 ntBASIC10.52□□□□□ -0.72
APOBP04114 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOBP04114 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOBP04114 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.72
APOBP04114 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.52□□□□□ -0.72
APOBP04114 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC10.52□□□□□ -0.72
APOBP04114 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC10.52□□□□□ -0.72
APOBP04114 AC105021.1-202ENST00000570572 669 ntBASIC10.52□□□□□ -0.72
APOBP04114 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC10.52□□□□□ -0.72
APOBP04114 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC10.52□□□□□ -0.72
APOBP04114 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.52□□□□□ -0.72
APOBP04114 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOBP04114 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.52□□□□□ -0.72
APOBP04114 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.52□□□□□ -0.73
APOBP04114 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOBP04114 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOBP04114 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC10.52□□□□□ -0.73
APOBP04114 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOBP04114 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOBP04114 USP49-202ENST00000373010 2446 ntTSL 5 BASIC10.52□□□□□ -0.73
APOBP04114 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOBP04114 MIR1908-201ENST00000410394 80 ntBASIC10.52□□□□□ -0.73
APOBP04114 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC10.52□□□□□ -0.73
APOBP04114 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
APOBP04114 RHOQP1-201ENST00000555758 579 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms