Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PDGFAP04085 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PDGFAP04085 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.08■□□□□ 0.16
PDGFAP04085 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.08■□□□□ 0.16
PDGFAP04085 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.08■□□□□ 0.16
PDGFAP04085 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.08■□□□□ 0.16
PDGFAP04085 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.08■□□□□ 0.16
PDGFAP04085 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.08■□□□□ 0.16
PDGFAP04085 AC010507.1-201ENST00000633895 436 ntBASIC16.08■□□□□ 0.16
PDGFAP04085 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PDGFAP04085 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.08■□□□□ 0.16
PDGFAP04085 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PDGFAP04085 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.08■□□□□ 0.16
PDGFAP04085 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.08■□□□□ 0.16
PDGFAP04085 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PDGFAP04085 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PDGFAP04085 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 KLF4P1-201ENST00000412782 1185 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFAP04085 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFAP04085 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 PDPK2P-202ENST00000562415 1191 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.07■□□□□ 0.16
PDGFAP04085 AC093028.1-201ENST00000622998 982 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 AC004877.2-201ENST00000623941 599 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 AC012183.1-201ENST00000625197 499 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.07■□□□□ 0.16
PDGFAP04085 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 LINC00896-202ENST00000609602 2128 ntBASIC16.07■□□□□ 0.16
PDGFAP04085 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFAP04085 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.07■□□□□ 0.16
PDGFAP04085 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PDGFAP04085 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
PDGFAP04085 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFAP04085 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 FAM8A3P-201ENST00000427218 844 ntBASIC16.06■□□□□ 0.16
PDGFAP04085 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 DUTP2-201ENST00000519164 463 ntBASIC16.06■□□□□ 0.16
PDGFAP04085 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.06■□□□□ 0.16
PDGFAP04085 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFAP04085 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.06■□□□□ 0.16
PDGFAP04085 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.06■□□□□ 0.16
PDGFAP04085 AC019129.2-201ENST00000609837 1235 ntBASIC16.06■□□□□ 0.16
PDGFAP04085 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDGFAP04085 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms