Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC079602.3-201ENST00000623931 403 ntBASIC16.25■□□□□ 0.19
MT-ND1P03886 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
MT-ND1P03886 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MT-ND1P03886 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND1P03886 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-ND1P03886 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.24■□□□□ 0.19
MT-ND1P03886 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND1P03886 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
MT-ND1P03886 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MT-ND1P03886 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 AL441883.1-201ENST00000566170 1045 ntBASIC16.24■□□□□ 0.19
MT-ND1P03886 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.24■□□□□ 0.19
MT-ND1P03886 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.24■□□□□ 0.19
MT-ND1P03886 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
MT-ND1P03886 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
MT-ND1P03886 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.23■□□□□ 0.19
MT-ND1P03886 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-ND1P03886 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 STARP1-201ENST00000397973 869 ntBASIC16.23■□□□□ 0.19
MT-ND1P03886 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MT-ND1P03886 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 TSPY12P-201ENST00000421279 868 ntBASIC16.23■□□□□ 0.19
MT-ND1P03886 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.23■□□□□ 0.19
MT-ND1P03886 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
MT-ND1P03886 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.23■□□□□ 0.19
MT-ND1P03886 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 AC009154.2-201ENST00000621177 724 ntBASIC16.23■□□□□ 0.19
MT-ND1P03886 AC133561.5-201ENST00000635547 218 ntBASIC16.23■□□□□ 0.19
MT-ND1P03886 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MT-ND1P03886 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
MT-ND1P03886 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
MT-ND1P03886 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.23■□□□□ 0.19
MT-ND1P03886 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
MT-ND1P03886 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.22■□□□□ 0.19
MT-ND1P03886 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.22■□□□□ 0.19
MT-ND1P03886 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MT-ND1P03886 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.22■□□□□ 0.19
MT-ND1P03886 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms