Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.53■□□□□ 0.56
CHRNA1P02708 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA1P02708 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 AC008764.6-201ENST00000595909 2069 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA1P02708 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 CNN2P2-201ENST00000443536 909 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 CNN2P3-201ENST00000450201 906 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
CHRNA1P02708 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA1P02708 AL136317.3-201ENST00000618497 906 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA1P02708 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 AC084121.4-201ENST00000641598 221 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 AF228730.8-201ENST00000642140 221 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA1P02708 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CHRNA1P02708 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 TOP3BP1-201ENST00000420768 1380 ntBASIC18.53■□□□□ 0.56
CHRNA1P02708 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA1P02708 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA1P02708 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA1P02708 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 HCG4-201ENST00000418983 998 ntBASIC18.52■□□□□ 0.56
CHRNA1P02708 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.52■□□□□ 0.56
CHRNA1P02708 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.52■□□□□ 0.56
CHRNA1P02708 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.52■□□□□ 0.56
CHRNA1P02708 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.52■□□□□ 0.56
CHRNA1P02708 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA1P02708 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.52■□□□□ 0.56
CHRNA1P02708 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.52■□□□□ 0.56
CHRNA1P02708 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.52■□□□□ 0.56
CHRNA1P02708 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CHRNA1P02708 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA1P02708 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
CHRNA1P02708 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.52■□□□□ 0.55
CHRNA1P02708 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.55
CHRNA1P02708 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA1P02708 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA1P02708 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA1P02708 AC093525.9-201ENST00000624961 1746 ntBASIC18.52■□□□□ 0.55
CHRNA1P02708 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 TUBB3P1-201ENST00000405796 1332 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 UXT-AS1-201ENST00000590504 1525 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 RNU1-129P-201ENST00000384064 167 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.51■□□□□ 0.55
CHRNA1P02708 AC055876.3-201ENST00000431496 288 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA1P02708 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.51■□□□□ 0.55
CHRNA1P02708 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 IGHV3-62-201ENST00000520057 340 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA1P02708 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.51■□□□□ 0.55
CHRNA1P02708 KRT8P23-201ENST00000560090 1207 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 AC026150.2-201ENST00000564693 1156 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 U1.21-201ENST00000580816 167 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 AC138649.4-201ENST00000612222 287 ntBASIC18.51■□□□□ 0.55
CHRNA1P02708 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA1P02708 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms