Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.23■□□□□ 0.03
APOC1P02654 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.23■□□□□ 0.03
APOC1P02654 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.23■□□□□ 0.03
APOC1P02654 AC019129.2-201ENST00000609837 1235 ntBASIC15.23■□□□□ 0.03
APOC1P02654 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.23■□□□□ 0.03
APOC1P02654 AL590326.2-201ENST00000625139 305 ntBASIC15.23■□□□□ 0.03
APOC1P02654 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.23■□□□□ 0.03
APOC1P02654 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.23■□□□□ 0.03
APOC1P02654 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
APOC1P02654 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC1P02654 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
APOC1P02654 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC1P02654 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC1P02654 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC1P02654 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.22■□□□□ 0.03
APOC1P02654 Z69720.1-201ENST00000601483 472 ntBASIC15.22■□□□□ 0.03
APOC1P02654 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC1P02654 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
APOC1P02654 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
APOC1P02654 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
APOC1P02654 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.21■□□□□ 0.03
APOC1P02654 AC005332.1-201ENST00000577698 1310 ntBASIC15.21■□□□□ 0.03
APOC1P02654 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
APOC1P02654 AL136379.1-201ENST00000623471 2642 ntBASIC15.21■□□□□ 0.03
APOC1P02654 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
APOC1P02654 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.21■□□□□ 0.03
APOC1P02654 KRT18P21-201ENST00000515767 1272 ntBASIC15.21■□□□□ 0.03
APOC1P02654 NTF6B-201ENST00000591913 560 ntBASIC15.21■□□□□ 0.03
APOC1P02654 AC005336.2-201ENST00000593183 939 ntBASIC15.21■□□□□ 0.03
APOC1P02654 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
APOC1P02654 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
APOC1P02654 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC1P02654 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.21■□□□□ 0.03
APOC1P02654 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.21■□□□□ 0.02
APOC1P02654 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.21■□□□□ 0.02
APOC1P02654 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APOC1P02654 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.21■□□□□ 0.02
APOC1P02654 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOC1P02654 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms